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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
WGBS
Assay category
18
DNA methylation
Date released
14
July, 2019
4
August, 2017
Available data
2032
bam
1750
bigWig
1116
tsv
1039
fastq
926
bed narrowPeak
632
bigBed narrowPeak
248
bed broadPeak
246
bigBed broadPeak
221
bed bed3+
161
txt
112
zippedFastqFolder
74
tagAlign
64
xls
23
hic
22
bedpe bed3+
18
bed bedMethyl
18
bigBed bedMethyl
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
vcf
Organism
18
Homo sapiens
Biosample type
9
primary cell
9
tissue
Organ
6
epithelium
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
connective tissue
1
eye
1
pericardium
1
vasculature
Project
18
AMP
Genome assembly (visualization)
18
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
WGBS
target.investigated_as!
histone modification
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
18 results
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RRBS
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
See all biosamples
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