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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
20
total RNA-seq
2
Hi-C
Assay category
DNA accessibility
44
DNA binding
20
Transcription
2
3D chromatin structure
Target of assay
29
histone
29
histone modification
15
narrow histone mark
14
broad histone mark
10
control
5
RNA binding protein
5
transcription factor
Date released
664
February, 2021
406
November, 2017
400
August, 2017
348
May, 2021
277
October, 2019
240
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
28
March, 2020
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
May, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
March, 2019
Available data
64
bam
54
bigWig
34
bed narrowPeak
23
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
66
Homo sapiens
Biosample type
31
primary cell
20
tissue
15
cell line
Organ
35
pancreas
21
epithelium
12
connective tissue
10
musculature of body
5
heart
3
eye
3
kidney
Project
66
AMP
Genome assembly (visualization)
56
hg19
54
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
37
inconsistent ontology term
assay_title!
pCHi-C
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
total RNA-seq
Hi-C
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
cardiac muscle cell
3
epithelial cell of proximal tubule
3
+ See 2 more…
tissue
islet of Langerhans
19
1
cell line
EndoC_BH1
13
1
1
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