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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
18
DNA binding
2
3D chromatin structure
2
DNA accessibility
Target of assay
16
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
2
control
Date released
21
October, 2019
1
March, 2020
Available data
19
bam
14
bigWig
12
bed narrowPeak
11
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tagAlign
1
tar
Organism
22
Homo sapiens
Biosample type
20
primary cell
2
tissue
Organ
937
pancreas
782
liver
670
connective tissue
505
epithelium
487
adipose tissue
320
heart
271
kidney
252
brain
224
vasculature
220
blood vessel
158
bone element
137
artery
86
limb
69
blood
69
bodily fluid
62
musculature of body
53
eye
41
nerve
37
embryo
23
spleen
20
vein
19
lung
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
22
AMP
Genome assembly (visualization)
16
hg19
11
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
pCHi-C
DNase-seq
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
Hi-C
ATAC-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
tissue
islet of Langerhans
1
pituitary gland
1
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