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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
73
single cell RNA-seq
49
ATAC-seq
41
WGBS
snATAC-seq
3
Hi-C
Assay category
165
Transcription
49
DNA accessibility
41
DNA methylation
3
3D chromatin structure
Date released
113
May, 2022
76
February, 2023
59
September, 2020
February, 2021
7
August, 2020
3
October, 2022
Available data
132
zippedFastqFolder
124
fastq
10
bigWig
3
bedpe bed3+
3
cool
3
hic
Organism
258
Homo sapiens
Biosample type
258
primary cell
Organ
146
epithelium
146
pancreas
Project
258
HPAP
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
3202
AMP-T2D consortium
308
Kyle Gaulton, UCSD
258
Klaus Kaestner, Upenn
136
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
9
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
3
audit script error
assay_title!
pCHi-C
snATAC-seq
month_released!
February, 2021
BIOSAMPLE
ASSAY
258 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
42
29
25
1
Langerhans cell
73
pancreatic beta cell
11
16
16
1
exocrine cell
39
pancreatic acinar cell
4
1
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