Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
ChIP-seq
4
DNase-seq
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
19
Transcription
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
17
October, 2019
6
June, 2019
1
February, 2020
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
52
tissue
4
primary cell
Organ
925
pancreas
730
liver
669
connective tissue
516
epithelium
484
adipose tissue
379
heart
343
kidney
281
brain
230
vasculature
225
blood vessel
158
bone element
140
artery
122
limb
94
musculature of body
56
eye
51
blood
51
bodily fluid
43
nerve
37
embryo
24
spleen
22
vein
18
ureter
16
skeleton
9
lung
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
56
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
56
AMP-T2D consortium
assay_title!
pCHi-C
snATAC-seq
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
56 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
RRBS
tissue
retina
15
3
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
2
1
1
Download