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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
69
DNase-seq
64
single cell RNA-seq
54
total RNA-seq
37
ChIP-seq
6
snATAC-seq
3
snDrop-seq
2
RNA microarray
2
STARR-seq
pCHi-C
1
FAIRE-seq
1
Hi-C
1
RRBS
1
small RNA-seq
Assay category
54
Transcription
Date released
49
August, 2021
4
October, 2019
1
July, 2019
Available data
49
txt
5
bam
5
bigWig
5
tsv
Organism
54
Homo sapiens
Biosample type
50
tissue
primary cell
4
cell line
Organ
464
connective tissue
397
adipose tissue
322
pancreas
184
liver
68
heart
62
bone element
59
blood vessel
59
vasculature
54
artery
54
kidney
38
epithelium
19
eye
17
brain
14
embryo
7
limb
5
musculature of body
5
nerve
4
skeleton
1
spinal cord
Project
54
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
49
Katalin Susztak, Upenn
5
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_title!
pCHi-C
biosample_type!
primary cell
BIOSAMPLE
ASSAY
54 results
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total RNA-seq
tissue
kidney
49
metanephros
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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