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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
total RNA-seq
123
ChIP-seq
20
ATAC-seq
3
WGBS
2
DNase-seq
1
Hi-C
1
RRBS
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Assay category
123
DNA binding
3
DNA methylation
Target of assay
65
histone modification
64
histone
43
control
42
narrow histone mark
37
transcription factor
broad histone mark
2
chromatin remodeller
1
RNA binding protein
Date released
50
May, 2020
38
December, 2017
32
August, 2017
4
November, 2018
2
October, 2019
Available data
112
bam
72
bed narrowPeak
72
bigWig
61
fastq
59
tagAlign
34
bigBed narrowPeak
3
bed bed3+
Organism
126
Homo sapiens
Biosample type
126
tissue
Organ
126
liver
Project
126
AMP
Genome assembly (visualization)
73
hg19
65
GRCh38
Lab
126
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
assay_title!
pCHi-C
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
126 results
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ChIP-seq
WGBS
tissue
liver
123
3
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