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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
14
total RNA-seq
5
ChIP-seq
4
DNase-seq
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
14
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
17
October, 2019
7
June, 2019
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
47
tissue
5
primary cell
Organ
616
liver
529
pancreas
368
epithelium
330
kidney
260
brain
203
connective tissue
185
heart
168
vasculature
162
blood vessel
115
limb
100
bone element
89
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
52
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
Project
52
AMP
Genome assembly (visualization)
34
hg19
6
GRCh38
Lab
52
AMP-T2D consortium
assay_title!
pCHi-C
files.file_type!
tsv
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
RRBS
tissue
retina
15
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
3
1
1
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