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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
15
WGBS
3
Hi-C
Assay category
34
DNA methylation
3
3D chromatin structure
Date released
23
July, 2019
7
November, 2018
4
August, 2017
3
October, 2022
Available data
2949
bam
2744
bigWig
1804
bed narrowPeak
1314
fastq
1169
tsv
1032
bigBed narrowPeak
390
tagAlign
319
bed broadPeak
283
bigBed broadPeak
265
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
hic
20
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
37
Homo sapiens
Biosample type
23
tissue
13
primary cell
1
cell line
Organ
9
epithelium
9
pancreas
8
heart
4
kidney
4
musculature of body
3
connective tissue
3
liver
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
34
AMP
3
HPAP
Genome assembly (visualization)
22
hg19
15
GRCh38
Lab
34
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
2
inconsistent ontology term
assay_title!
pCHi-C
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
37 results
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Clear Filters
RRBS
WGBS
Hi-C
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 8 more…
cell line
HepG2
1
See all biosamples
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