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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
15
WGBS
Assay category
34
DNA methylation
Date released
22
July, 2019
6
August, 2017
6
November, 2018
Available data
2695
bam
2553
bigWig
tsv
1296
bed narrowPeak
927
fastq
608
bigBed narrowPeak
378
tagAlign
258
bed bed3+
250
bed broadPeak
213
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
18
hic
16
bedpe bed3+
11
bed bed3
8
csv
7
bed bedgraph
3
cool
2
hdf5
1
bedpe
1
tagAlign bed3+
Organism
34
Homo sapiens
Biosample type
24
tissue
10
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
blood vessel
1
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
pCHi-C
organ_slims!
blood vessel
files.file_type!
tsv
biosample_type!
cell line
BIOSAMPLE
ASSAY
34 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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