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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
3
WGBS
2
ATAC-seq
1
DNase-seq
pCHi-C
Assay category
37
DNA binding
3
DNA accessibility
3
DNA methylation
Target of assay
19
control
17
transcription factor
5
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Date released
23
October, 2018
18
August, 2017
1
November, 2018
1
October, 2017
Available data
442
bam
425
bigWig
400
tsv
43
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
43
tissue
Organ
471
pancreas
465
liver
257
epithelium
100
connective tissue
60
blood
60
bodily fluid
43
adipose tissue
27
embryo
24
spleen
21
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
43
AMP
Genome assembly (visualization)
23
GRCh38
21
hg19
Lab
43
AMP-T2D consortium
Audit category:
12
missing controlled_by
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
omental fat pad
11
1
1
subcutaneous adipose tissue
12
1
white adipose tissue
12
adipose tissue
2
3
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