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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
23
ChIP-seq
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
23
DNA binding
Target of assay
27
histone
27
histone modification
narrow histone mark
23
control
Date released
713
February, 2021
368
November, 2017
323
August, 2017
318
May, 2021
313
May, 2020
274
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
169
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
29
March, 2020
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
3
March, 2019
1
August, 2022
Available data
256
bam
233
bigWig
188
tsv
23
tagAlign
Organism
313
Homo sapiens
Biosample type
166
tissue
147
primary cell
Organ
166
liver
Project
268
AMP
45
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
268
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_title!
pCHi-C
lab.title!
Bing Ren, UCSD
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
313 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
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