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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
42
DNA binding
9
DNA accessibility
Target of assay
37
transcription factor
4
RNA binding protein
4
chromatin remodeller
3
control
Date released
27
December, 2018
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
42
bam
42
fastq
40
bigWig
39
bed narrowPeak
39
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
43
cell line
8
primary cell
Organ
944
pancreas
783
liver
679
connective tissue
524
epithelium
489
adipose tissue
390
heart
352
kidney
284
brain
235
vasculature
229
blood vessel
158
bone element
141
artery
122
limb
95
musculature of body
57
eye
51
blood
51
bodily fluid
43
nerve
37
embryo
22
vein
19
lung
18
ureter
17
spleen
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
43
AMP
8
T1D
Genome assembly (visualization)
40
hg19
39
GRCh38
Lab
43
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
pCHi-C
lab.title!
Maike Sander, UCSD
month_released!
January, 2019
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
42
1
primary cell
peripheral blood mononuclear cell
8
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