Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
8
single cell RNA-seq
Assay category
12
DNA accessibility
8
Transcription
Date released
10
February, 2023
8
February, 2021
1
November, 2018
1
September, 2018
Available data
3391
bam
3169
bigWig
1817
bed narrowPeak
1569
tsv
1357
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
hic
20
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
20
Homo sapiens
Biosample type
11
tissue
5
in vitro differentiated cells
3
primary cell
1
cell line
Organ
6
connective tissue
5
kidney
4
bone element
4
skeleton
2
liver
1
brain
Project
20
AMP
Genome assembly (visualization)
12
hg19
2
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
5
audit script error
1
inconsistent replicate
assay_title!
pCHi-C
month_released!
August, 2022
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
single cell RNA-seq
tissue
kidney
5
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
+ See 2 more…
in vitro differentiated cells
chondrocyte
5
primary cell
pancreatic cell
2
osteoblast
1
cell line
HepG2
1
See all biosamples
Download