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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
pCHi-C
Assay category
13
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
9
November, 2018
December, 2018
7
January, 2019
1
October, 2017
Available data
17
bam
17
fastq
13
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
945
pancreas
787
liver
679
connective tissue
524
epithelium
489
adipose tissue
352
kidney
350
heart
284
brain
235
vasculature
229
blood vessel
158
bone element
141
artery
122
limb
95
musculature of body
57
eye
43
nerve
42
blood
42
bodily fluid
37
embryo
22
vein
19
lung
18
ureter
17
spleen
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
17
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
17
AMP-T2D consortium
assay_title!
pCHi-C
month_released!
December, 2018
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
13
2
1
1
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