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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
5
ChIP-seq
4
DNase-seq
pCHi-C
Assay category
32
DNA accessibility
19
Transcription
5
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
17
October, 2019
7
June, 2019
1
February, 2020
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
56
Homo sapiens
Biosample type
52
tissue
4
primary cell
Organ
939
pancreas
778
liver
661
connective tissue
511
epithelium
477
adipose tissue
341
kidney
325
heart
266
brain
223
vasculature
218
blood vessel
158
bone element
138
artery
117
limb
85
musculature of body
69
blood
69
bodily fluid
56
eye
43
nerve
37
embryo
24
spleen
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
56
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
56
AMP-T2D consortium
assay_title!
pCHi-C
month_released!
July, 2019
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
tissue
retina
15
3
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
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