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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
pCHi-C
6
total RNA-seq
3
Hi-C
2
ATAC-seq
1
ChIP-seq
Assay category
6
Transcription
3
3D chromatin structure
2
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
343
May, 2021
324
November, 2017
168
February, 2021
147
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
23
January, 2019
21
November, 2019
12
March, 2020
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
Available data
9
bigWig
7
bam
7
tsv
3
bedpe bed3+
3
hic
1
bed narrowPeak
Organism
12
Homo sapiens
Biosample type
tissue
7
cell line
4
in vitro differentiated cells
1
primary cell
Organ
6
epithelium
5
pancreas
1
blood vessel
1
vasculature
1
vein
Project
9
AMP
3
T1D
Genome assembly (visualization)
12
hg19
7
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
assay_title!
pCHi-C
biosample_type!
tissue
BIOSAMPLE
ASSAY
12 results
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Clear Filters
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
primary cell
endothelial cell of umbilical vein
1
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