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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
pCHi-C
10
Hi-C
4
ATAC-seq
2
total RNA-seq
Assay category
10
3D chromatin structure
4
DNA accessibility
2
Transcription
Date released
270
August, 2021
205
February, 2023
176
May, 2022
142
February, 2021
129
August, 2017
105
May, 2021
60
October, 2019
59
September, 2020
57
May, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
March, 2020
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
20
bigWig
bam
15
tsv
10
bedpe bed3+
10
hic
3
bed narrowPeak
Organism
16
Homo sapiens
Biosample type
11
tissue
2
cell line
2
in vitro differentiated cells
1
primary cell
Organ
7
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
2
T1D
Genome assembly (visualization)
14
hg19
Lab
16
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
pCHi-C
files.file_type!
bam
BIOSAMPLE
ASSAY
16 results
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Clear Filters
Hi-C
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
2
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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