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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
ChIP-seq
34
ATAC-seq
pCHi-C
9
total RNA-seq
1
DNAme array
Assay category
165
DNA binding
34
DNA accessibility
9
Transcription
1
DNA methylation
Target of assay
140
histone
140
histone modification
76
broad histone mark
64
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
406
November, 2017
322
August, 2017
294
October, 2019
218
June, 2019
209
May, 2021
200
May, 2022
196
August, 2021
189
February, 2023
154
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
17
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2022
1
December, 2019
Available data
303
bigWig
277
bam
tsv
133
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
209
Homo sapiens
Biosample type
138
primary cell
53
in vitro differentiated cells
17
cell line
1
tissue
Organ
21
pancreas
20
epithelium
Project
124
AMP
85
T1D
Genome assembly (visualization)
143
hg19
103
GRCh38
Lab
167
Kyle Gaulton, UCSD
42
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
assay_title!
pCHi-C
files.file_type!
tsv
BIOSAMPLE
ASSAY
209 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
in vitro differentiated cells
embryonic stem cell
37
5
5
cardiomyocytes
3
pancreatic PP cell
3
cell line
EndoC_BH1
1
16
tissue
pancreas
1
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