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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
50
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
25
December, 2018
13
November, 2018
12
January, 2019
8
January, 2021
1
January, 2018
Available data
50
bam
50
fastq
45
bigWig
44
bed narrowPeak
44
bigBed narrowPeak
Organism
59
Homo sapiens
Biosample type
51
cell line
8
primary cell
Organ
936
pancreas
730
liver
669
connective tissue
516
epithelium
484
adipose tissue
379
heart
349
kidney
281
brain
230
vasculature
225
blood vessel
158
bone element
140
artery
122
limb
95
musculature of body
59
blood
59
bodily fluid
56
eye
43
nerve
37
embryo
24
spleen
22
vein
19
lung
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
51
AMP
8
T1D
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
51
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
pCHi-C
organ_slims!
ureter
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
50
1
primary cell
peripheral blood mononuclear cell
8
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