Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
4
Hi-C
2
RRBS
2
total RNA-seq
1
WGBS
pCHi-C
1
single cell RNA-seq
Assay category
12
DNA binding
4
3D chromatin structure
3
DNA methylation
3
Transcription
Target of assay
6
control
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
Date released
11
August, 2017
5
July, 2019
2
February, 2020
2
June, 2019
1
May, 2019
1
May, 2022
Available data
4
bam
2
tagAlign
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
22
Homo sapiens
Biosample type
20
tissue
2
primary cell
Organ
287
pancreas
223
kidney
213
epithelium
164
liver
162
heart
120
brain
91
connective tissue
88
bone element
70
blood vessel
70
vasculature
63
adipose tissue
48
artery
26
limb
23
eye
22
musculature of body
19
lung
14
blood
14
bodily fluid
12
nerve
10
spleen
8
embryo
5
vein
4
gonad
4
ovary
4
skeleton
1
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
Project
22
AMP
Genome assembly (visualization)
hg19
53
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
pCHi-C
assembly!
hg19
BIOSAMPLE
ASSAY
22 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
RRBS
total RNA-seq
WGBS
single cell RNA-seq
tissue
skeletal muscle tissue
9
2
1
gastrocnemius medialis
4
1
muscle of leg
1
1
left ventricle myocardium
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
Download