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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
6
single cell RNA-seq
pCHi-C
Assay category
67
Transcription
Date released
52
February, 2021
6
August, 2021
5
July, 2019
3
February, 2020
1
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
67
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
67
Homo sapiens
Biosample type
52
cell line
13
tissue
2
primary cell
Organ
476
connective tissue
416
pancreas
400
adipose tissue
172
liver
165
heart
156
epithelium
67
blood vessel
67
vasculature
58
artery
58
bone element
24
brain
22
kidney
14
embryo
8
musculature of body
7
limb
5
eye
5
nerve
1
pericardium
1
spinal cord
Project
67
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
67
AMP-T2D consortium
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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