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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
RRBS
1
WGBS
Assay category
5
DNA methylation
Date released
3
July, 2019
1
August, 2017
1
November, 2018
Available data
1168
bam
1096
bigWig
724
fastq
694
bed narrowPeak
405
bigBed narrowPeak
371
tsv
153
tagAlign
87
bed broadPeak
87
bigBed broadPeak
73
zippedFastqFolder
47
bed bed3+
8
bedpe bed3+
7
bed bed3
7
bed bedgraph
6
hic
5
bed bedMethyl
5
bigBed bedMethyl
4
txt
3
hdf5
3
tar
2
csv
2
ibed
1
vcf
Organism
5
Homo sapiens
Biosample type
tissue
4
primary cell
1
cell line
Organ
epithelium
3
kidney
2
liver
1
brain
1
connective tissue
1
eye
1
heart
1
musculature of body
1
vasculature
Project
5
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
shRNA RNA-seq
biosample_type!
tissue
organ_slims!
epithelium
BIOSAMPLE
ASSAY
5 results
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RRBS
WGBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
cell line
HepG2
1
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