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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
29
ATAC-seq
24
total RNA-seq
5
DNase-seq
4
pCHi-C
Assay category
37
DNA binding
34
DNA accessibility
24
Transcription
Target of assay
26
histone
26
histone modification
16
broad histone mark
11
control
10
narrow histone mark
Date released
63
October, 2019
31
February, 2023
3
June, 2019
2
February, 2020
Available data
57
bed narrowPeak
45
bam
34
bigWig
29
bigBed narrowPeak
10
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
Organism
99
Homo sapiens
Biosample type
99
tissue
5
primary cell
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
313
heart
299
kidney
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
73
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
99
AMP
Genome assembly (visualization)
61
hg19
34
GRCh38
Lab
99
AMP-T2D consortium
assay_title!
shRNA RNA-seq
BIOSAMPLE
ASSAY
99 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
pCHi-C
tissue
tibial nerve
35
1
5
2
islet of Langerhans
2
1
14
4
retina
15
3
3
pigmented layer of retina
12
2
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