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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
Assay category
9
DNA accessibility
Date released
6
June, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
593
bam
570
bigWig
479
tsv
101
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
9
Homo sapiens
Biosample type
6
primary cell
2
tissue
1
in vitro differentiated cells
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
0
gonad
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
8
hg19
Lab
9
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
shRNA RNA-seq
BIOSAMPLE
ASSAY
9 results
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DNase-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
in vitro differentiated cells
adipocyte
1
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