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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
392
ChIP-seq
Assay category
392
DNA binding
Target of assay
243
transcription factor
75
histone
75
histone modification
71
control
66
recombinant protein
46
broad histone mark
37
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
554
February, 2021
392
November, 2017
272
August, 2017
264
May, 2021
238
May, 2020
235
October, 2019
120
May, 2019
116
July, 2018
94
December, 2017
79
April, 2019
77
November, 2018
76
October, 2018
71
July, 2019
58
September, 2018
39
August, 2021
39
February, 2018
34
December, 2018
33
November, 2019
31
June, 2019
30
January, 2019
16
March, 2020
8
October, 2017
6
April, 2018
6
May, 2022
6
September, 2017
5
December, 2019
4
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
392
Homo sapiens
Biosample type
314
cell line
69
tissue
9
primary cell
Organ
314
liver
78
brain
6
epithelium
6
vasculature
3
blood vessel
Project
392
AMP
Genome assembly (visualization)
280
GRCh38
280
hg19
Lab
392
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
assay_title!
single cell RNA-seq
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
392 results
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Clear Filters
ChIP-seq
cell line
HepG2
314
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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