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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
23
ChIP-seq
single cell RNA-seq
3
total RNA-seq
2
WGBS
DNase-seq
1
pCHi-C
Assay category
35
DNA accessibility
23
DNA binding
3
Transcription
2
DNA methylation
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
35
February, 2023
11
May, 2019
10
October, 2019
3
February, 2020
2
February, 2021
2
July, 2019
1
March, 2020
Available data
35
bed narrowPeak
25
bam
4
tsv
2
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
64
Homo sapiens
Biosample type
57
tissue
5
primary cell
2
cell line
Organ
286
pancreas
205
epithelium
164
liver
152
kidney
112
brain
109
heart
94
connective tissue
89
bone element
65
adipose tissue
64
blood vessel
64
vasculature
46
artery
27
eye
26
limb
22
musculature of body
14
blood
14
bodily fluid
12
nerve
11
lung
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
64
AMP
Genome assembly (visualization)
180
GRCh38
hg19
Lab
64
AMP-T2D consortium
assay_title!
single cell RNA-seq
DNase-seq
assembly!
hg19
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
WGBS
pCHi-C
tissue
coronary artery
35
2
1
tibial artery
5
1
aorta
2
2
1
ascending aorta
3
1
thoracic aorta
4
primary cell
endothelial cell of umbilical vein
5
cell line
smooth muscle cell of the coronary artery
2
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