Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
23
ChIP-seq
single cell RNA-seq
3
total RNA-seq
1
DNase-seq
1
WGBS
1
pCHi-C
Assay category
36
DNA accessibility
23
DNA binding
3
Transcription
1
DNA methylation
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
35
February, 2023
11
May, 2019
10
October, 2019
3
February, 2020
2
February, 2021
1
July, 2019
1
June, 2019
1
March, 2020
Available data
36
bed narrowPeak
26
bam
4
tsv
2
bigWig
2
tagAlign
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
64
Homo sapiens
Biosample type
56
tissue
6
primary cell
2
cell line
Organ
284
pancreas
213
epithelium
164
liver
161
kidney
122
brain
106
heart
93
connective tissue
89
bone element
64
blood vessel
64
vasculature
63
adipose tissue
46
artery
27
eye
25
limb
21
musculature of body
14
blood
14
bodily fluid
12
nerve
11
lung
9
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
64
AMP
Genome assembly (visualization)
190
GRCh38
hg19
Lab
64
AMP-T2D consortium
assay_title!
single cell RNA-seq
assembly!
hg19
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
64 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
DNase-seq
WGBS
pCHi-C
tissue
coronary artery
35
2
1
tibial artery
5
1
aorta
2
1
1
ascending aorta
3
1
thoracic aorta
4
primary cell
endothelial cell of umbilical vein
5
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
2
Download