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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
single cell RNA-seq
ATAC-seq
48
snATAC-seq
47
WGBS
3
Hi-C
Assay category
92
Transcription
48
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
76
February, 2023
62
May, 2022
33
February, 2021
16
September, 2020
3
October, 2022
Available data
125
fastq
62
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
190
Homo sapiens
Biosample type
190
primary cell
Organ
103
epithelium
103
pancreas
Project
3599
AMP
233
T1D
190
HPAP
10
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
190
Klaus Kaestner, Upenn
Audit category:
30
audit script error
assay_title!
single cell RNA-seq
ATAC-seq
BIOSAMPLE
ASSAY
190 results
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total RNA-seq
snATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
42
31
1
Langerhans cell
48
exocrine cell
39
pancreatic beta cell
11
16
1
pancreatic acinar cell
1
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