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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
2
Hi-C
1
WGBS
Assay category
9
DNA accessibility
2
3D chromatin structure
1
DNA methylation
Date released
5
June, 2019
4
October, 2019
3
July, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
62
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
12
Homo sapiens
Biosample type
6
primary cell
6
tissue
Organ
82
kidney
38
heart
38
musculature of body
37
brain
37
limb
35
pancreas
30
connective tissue
27
epithelium
18
ureter
16
liver
15
vasculature
12
blood vessel
8
adipose tissue
5
eye
4
artery
3
embryo
3
spleen
2
nerve
2
vein
1
pericardium
Project
12
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
12
AMP-T2D consortium
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
12 results
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DNase-seq
Hi-C
WGBS
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
aorta
1
ascending aorta
1
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