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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
20
total RNA-seq
13
ChIP-seq
2
Hi-C
Assay category
25
DNA accessibility
20
Transcription
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
406
November, 2017
399
May, 2021
354
August, 2017
341
May, 2020
313
October, 2019
311
February, 2021
June, 2019
212
August, 2021
203
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
94
December, 2017
93
July, 2019
86
November, 2018
80
April, 2019
72
September, 2018
63
March, 2020
60
November, 2019
53
October, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
7
August, 2020
7
December, 2019
7
January, 2018
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2022
Available data
58
bam
36
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
60
Homo sapiens
Biosample type
39
tissue
16
cell line
5
in vitro differentiated cells
Organ
55
pancreas
16
epithelium
adipose tissue
1
connective tissue
Project
60
AMP
Genome assembly (visualization)
58
hg19
56
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_title!
single cell RNA-seq
month_released!
June, 2019
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
cell line
EndoC_BH1
1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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