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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
35
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
1
February, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
43
tissue
Organ
868
pancreas
788
liver
662
connective tissue
490
adipose tissue
434
epithelium
265
heart
253
brain
223
vasculature
219
blood vessel
209
kidney
159
bone element
137
artery
90
limb
69
blood
69
bodily fluid
54
eye
52
musculature of body
43
nerve
37
embryo
25
spleen
22
vein
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
43
AMP-T2D consortium
assay_title!
single cell RNA-seq
month_released!
June, 2019
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
35
5
2
1
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