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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
10
WGBS
1
Hi-C
Assay category
29
DNA methylation
1
3D chromatin structure
Date released
23
July, 2019
November, 2018
6
August, 2017
1
March, 2019
Available data
3205
bam
2989
bigWig
1744
bed narrowPeak
1395
tsv
1143
fastq
969
bigBed narrowPeak
398
tagAlign
313
bed broadPeak
276
bigBed broadPeak
264
bed bed3+
148
txt
101
zippedFastqFolder
64
xls
29
bed bedMethyl
29
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
30
Homo sapiens
Biosample type
20
tissue
10
primary cell
Organ
8
heart
6
epithelium
4
kidney
4
musculature of body
3
connective tissue
3
pancreas
2
adipose tissue
2
brain
2
liver
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
30
AMP
Genome assembly (visualization)
20
hg19
10
GRCh38
Lab
29
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
assay_title!
single cell RNA-seq
month_released!
November, 2018
BIOSAMPLE
ASSAY
30 results
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RRBS
WGBS
Hi-C
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
islet of Langerhans
1
1
skeletal muscle tissue
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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