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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
single cell RNA-seq
49
ATAC-seq
snATAC-seq
47
WGBS
3
Hi-C
Assay category
92
Transcription
49
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
80
May, 2022
76
February, 2023
19
September, 2020
7
August, 2020
6
February, 2021
3
October, 2022
Available data
108
fastq
80
zippedFastqFolder
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
191
Homo sapiens
Biosample type
191
primary cell
Organ
152
epithelium
152
pancreas
Project
3990
AMP
226
T1D
191
HPAP
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
191
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assay_title!
single cell RNA-seq
snATAC-seq
month_released!
September, 2018
BIOSAMPLE
ASSAY
191 results
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total RNA-seq
ATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
42
29
31
1
pancreatic beta cell
11
16
16
1
exocrine cell
39
pancreatic acinar cell
4
1
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