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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
26
total RNA-seq
18
ATAC-seq
1
Hi-C
single cell RNA-seq
Assay category
32
DNA binding
26
Transcription
18
DNA accessibility
1
3D chromatin structure
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
697
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
73
bam
73
fastq
72
bigWig
46
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
bed broadPeak
1
bedpe
1
hic
Organism
77
Homo sapiens
Biosample type
72
primary cell
5
tissue
Organ
77
pancreas
61
epithelium
Project
77
AMP
Genome assembly (visualization)
75
hg19
74
GRCh38
Lab
72
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
32
missing controlled_by
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
tissue
islet of Langerhans
4
1
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