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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
336
ChIP-seq
Assay category
336
DNA binding
Target of assay
197
transcription factor
71
control
66
recombinant protein
65
histone
65
histone modification
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
697
February, 2021
399
May, 2021
370
August, 2017
341
May, 2020
336
November, 2017
305
October, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
October, 2017
19
September, 2020
16
January, 2021
15
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
6
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
1
August, 2018
1
August, 2022
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
336
Homo sapiens
Biosample type
257
cell line
76
tissue
3
primary cell
Organ
257
liver
79
brain
2
epithelium
2
vasculature
1
blood vessel
Project
336
AMP
Genome assembly (visualization)
225
GRCh38
211
hg19
Lab
336
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
assay_title!
single cell RNA-seq
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
336 results
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Clear Filters
ChIP-seq
cell line
HepG2
257
tissue
layer of hippocampus
22
caudate nucleus
14
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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