Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
14
ChIP-seq
4
DNase-seq
single cell RNA-seq
Assay category
56
Transcription
49
DNA accessibility
14
DNA binding
Target of assay
20
histone
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
8
October, 2019
3
July, 2019
3
May, 2019
2
February, 2020
2
June, 2019
Available data
82
bam
65
bigWig
56
tsv
54
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
119
Homo sapiens
Biosample type
66
cell line
51
tissue
2
primary cell
Organ
721
pancreas
687
liver
602
connective tissue
459
adipose tissue
361
epithelium
260
kidney
198
heart
159
bone element
159
vasculature
154
blood vessel
119
artery
96
brain
73
limb
68
blood
68
bodily fluid
62
musculature of body
58
eye
25
embryo
19
nerve
19
spleen
18
ureter
16
skeleton
11
lung
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
119
AMP
Genome assembly (visualization)
108
GRCh38
73
hg19
Lab
119
AMP-T2D consortium
assay_title!
single cell RNA-seq
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
119 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
3
2
tibial artery
1
1
5
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download