Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
DNase-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
66
DNA binding
8
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
7
May, 2019
6
February, 2021
5
July, 2019
3
February, 2020
Available data
78
bam
56
bed narrowPeak
55
bigWig
48
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
86
Homo sapiens
Biosample type
86
tissue
Organ
864
pancreas
784
liver
671
connective tissue
489
adipose tissue
435
epithelium
270
heart
251
brain
219
vasculature
215
blood vessel
209
kidney
159
bone element
135
artery
86
limb
69
blood
69
bodily fluid
62
musculature of body
57
eye
41
nerve
37
embryo
24
spleen
20
vein
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
86
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
86
AMP-T2D consortium
assay_title!
single cell RNA-seq
DNase-seq
BIOSAMPLE
ASSAY
86 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
35
1
5
tibial artery
23
1
1
muscle of leg
7
1
gastrocnemius medialis
1
4
distal epiphysis of femur
1
+ See 6 more…
See all biosamples
Download