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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
8
ATAC-seq
6
total RNA-seq
4
DNase-seq
Assay category
59
DNA binding
12
DNA accessibility
6
Transcription
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
69
October, 2019
6
February, 2021
2
February, 2020
Available data
74
bam
54
bed narrowPeak
52
bigWig
46
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
77
Homo sapiens
Biosample type
77
tissue
Organ
872
pancreas
790
liver
680
connective tissue
491
adipose tissue
454
epithelium
290
kidney
283
brain
260
heart
230
vasculature
224
blood vessel
159
bone element
139
artery
122
limb
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
18
ureter
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
77
AMP-T2D consortium
assay_title!
single cell RNA-seq
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
tissue
tibial nerve
35
1
5
2
tibial artery
23
1
1
2
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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