Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
47
DNA binding
44
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
February, 2021
5
May, 2019
1
July, 2019
Available data
96
bam
91
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
96
Homo sapiens
Biosample type
96
tissue
Organ
562
connective tissue
561
pancreas
531
liver
424
adipose tissue
226
heart
224
epithelium
214
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
96
AMP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
96
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
single cell RNA-seq
organ_slims!
bone marrow
BIOSAMPLE
ASSAY
96 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
5
13
1
muscle of arm
17
distal epiphysis of femur
1
+ See 7 more…
See all biosamples
Download