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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
1
pCHi-C
Assay category
11
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
histone
28
histone modification
16
broad histone mark
12
narrow histone mark
11
control
Date released
18
October, 2019
1
February, 2020
1
March, 2020
Available data
18
bam
7
bigWig
6
tsv
3
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
721
pancreas
688
liver
602
connective tissue
459
adipose tissue
361
epithelium
260
kidney
203
heart
159
bone element
159
vasculature
154
blood vessel
119
artery
96
brain
73
limb
68
blood
68
bodily fluid
62
musculature of body
58
eye
25
embryo
19
nerve
19
spleen
18
ureter
16
skeleton
11
lung
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
20
AMP-T2D consortium
assay_title!
single cell RNA-seq
target.investigated_as!
histone
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
11
5
2
1
ovary
1
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