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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
single cell RNA-seq
Assay category
67
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
other post-translational modification
Date released
697
February, 2021
411
August, 2017
404
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
84
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
84
bam
84
fastq
77
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
84
Homo sapiens
Biosample type
61
cell line
23
tissue
Organ
53
liver
15
blood
15
bodily fluid
7
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
84
AMP
Genome assembly (visualization)
76
GRCh38
68
hg19
Lab
84
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
single cell RNA-seq
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
84 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
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