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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
total RNA-seq
small RNA-seq
13
RRBS
12
WGBS
5
ATAC-seq
5
Hi-C
1
FAIRE-seq
Assay category
40
Transcription
25
DNA methylation
6
DNA accessibility
5
3D chromatin structure
Date released
683
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
315
November, 2017
227
October, 2019
204
February, 2023
199
May, 2022
188
June, 2019
168
July, 2018
94
December, 2017
92
May, 2019
86
November, 2018
80
April, 2019
76
July, 2019
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
February, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
October, 2017
6
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
October, 2022
Available data
55
bam
55
bigWig
40
tsv
21
bed bedMethyl
21
bigBed bedMethyl
6
bed narrowPeak
1
bed bed3+
1
bigBed narrowPeak
1
hdf5
Organism
76
Homo sapiens
Biosample type
54
tissue
22
primary cell
Organ
24
heart
15
connective tissue
brain
13
epithelium
12
vasculature
11
blood vessel
10
kidney
9
adipose tissue
8
musculature of body
7
liver
5
limb
4
pancreas
3
artery
2
pericardium
1
eye
Project
76
AMP
Genome assembly (visualization)
60
hg19
53
GRCh38
Lab
76
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
small RNA-seq
audit.ERROR.category!
audit script error
organ_slims!
brain
BIOSAMPLE
ASSAY
76 results
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total RNA-seq
RRBS
WGBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
gastrocnemius medialis
4
omental fat pad
4
subcutaneous adipose tissue
4
heart
2
1
+ See 19 more…
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
+ See 14 more…
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