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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
174
single cell RNA-seq
130
total RNA-seq
Assay category
304
Transcription
225
DNA accessibility
185
DNA binding
21
DNA methylation
16
3D chromatin structure
Date released
156
August, 2021
47
September, 2023
25
February, 2020
21
May, 2022
14
February, 2023
14
October, 2019
9
April, 2020
6
February, 2021
4
July, 2018
4
May, 2023
2
March, 2020
1
December, 2019
1
May, 2021
Available data
1034
tsv
bam
901
bigWig
103
fastq
72
txt
6
csv
Organism
304
Homo sapiens
Biosample type
304
tissue
184
primary cell
11
cell line
11
in vitro differentiated cells
2
stem cell
Organ
113
kidney
96
heart
22
liver
19
eye
14
pancreas
12
brain
9
blood vessel
9
lung
9
vasculature
4
artery
4
bone element
4
skeleton
3
adipose tissue
3
connective tissue
3
limb
3
musculature of body
2
epithelium
1
nerve
1
spinal cord
Project
241
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
161
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
9
Xin Sun, UCSD
6
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
assay_title!
small RNA-seq
files.file_type!
bam
BIOSAMPLE
ASSAY
304 results
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Clear Filters
single cell RNA-seq
total RNA-seq
tissue
kidney
64
49
islet of Langerhans
26
liver
1
20
heart left ventricle
18
left cardiac atrium
18
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