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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
917
total RNA-seq
174
single cell RNA-seq
small RNA-seq
Assay category
1091
Transcription
907
DNA binding
470
DNA accessibility
38
DNA methylation
16
3D chromatin structure
Date released
450
February, 2021
156
August, 2021
143
May, 2020
July, 2018
89
August, 2017
47
September, 2023
39
May, 2021
31
July, 2019
27
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
14
February, 2023
9
April, 2020
9
March, 2020
6
April, 2018
4
May, 2023
1
December, 2019
Available data
918
tsv
791
bam
785
bigWig
101
fastq
72
txt
6
csv
Organism
1091
Homo sapiens
Biosample type
1091
tissue
386
primary cell
138
in vitro differentiated cells
115
cell line
2
stem cell
Organ
455
connective tissue
397
adipose tissue
171
liver
169
pancreas
114
kidney
108
heart
62
bone element
19
eye
17
brain
13
blood vessel
13
vasculature
9
lung
7
limb
6
musculature of body
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
1028
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
786
GRCh38
786
hg19
Lab
942
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
assay_title!
small RNA-seq
month_released!
July, 2018
BIOSAMPLE
ASSAY
1091 results
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Clear Filters
total RNA-seq
single cell RNA-seq
tissue
adipose tissue
382
islet of Langerhans
178
liver
167
1
kidney
49
64
bone tissue
58
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