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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1028
total RNA-seq
174
single cell RNA-seq
small RNA-seq
Assay category
1202
Transcription
905
DNA binding
468
DNA accessibility
38
DNA methylation
9
3D chromatin structure
Date released
450
February, 2021
156
August, 2021
143
May, 2020
120
July, 2018
89
August, 2017
47
September, 2023
39
May, 2021
31
July, 2019
27
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
14
February, 2023
9
April, 2020
March, 2020
6
April, 2018
4
May, 2023
1
December, 2019
Available data
1027
tsv
900
bam
894
bigWig
103
fastq
72
txt
6
csv
Organism
1202
Homo sapiens
Biosample type
1202
tissue
434
primary cell
136
in vitro differentiated cells
111
cell line
2
stem cell
Organ
455
connective tissue
397
adipose tissue
286
pancreas
170
liver
114
kidney
106
heart
62
bone element
19
eye
17
brain
12
blood vessel
12
vasculature
9
lung
7
limb
5
nerve
4
artery
4
musculature of body
4
skeleton
2
epithelium
1
spinal cord
Project
1141
AMP
47
KPMP
9
LungMap
5
T1D
Genome assembly (visualization)
895
GRCh38
895
hg19
Lab
1053
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
assay_title!
small RNA-seq
month_released!
March, 2020
BIOSAMPLE
ASSAY
1202 results
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Clear Filters
total RNA-seq
single cell RNA-seq
tissue
adipose tissue
382
islet of Langerhans
296
liver
166
1
kidney
49
64
bone tissue
58
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