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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
867
total RNA-seq
173
single cell RNA-seq
small RNA-seq
Assay category
1040
Transcription
752
DNA binding
445
DNA accessibility
33
DNA methylation
15
3D chromatin structure
Date released
449
February, 2021
156
August, 2021
120
July, 2018
89
August, 2017
47
September, 2023
39
May, 2021
27
July, 2019
24
February, 2020
21
October, 2019
19
November, 2019
14
February, 2023
9
April, 2020
8
March, 2020
7
May, 2022
6
April, 2018
4
May, 2023
1
December, 2019
Available data
884
tsv
758
bam
752
bigWig
103
fastq
72
txt
5
csv
Organism
1040
Homo sapiens
Biosample type
1040
tissue
429
primary cell
138
in vitro differentiated cells
101
cell line
2
stem cell
Organ
455
connective tissue
397
adipose tissue
289
pancreas
liver
114
kidney
108
heart
62
bone element
19
eye
17
brain
13
blood vessel
13
vasculature
9
lung
7
limb
6
musculature of body
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
977
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
753
GRCh38
753
hg19
Lab
911
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
assay_title!
small RNA-seq
organ_slims!
liver
BIOSAMPLE
ASSAY
1040 results
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total RNA-seq
single cell RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
kidney
49
64
bone tissue
58
heart left ventricle
3
18
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