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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
ChIP-seq
22
total RNA-seq
16
ATAC-seq
4
pCHi-C
1
Hi-C
Assay category
195
DNA binding
22
Transcription
16
DNA accessibility
1
3D chromatin structure
Target of assay
168
histone
168
histone modification
129
narrow histone mark
39
broad histone mark
27
control
Date released
545
February, 2021
258
August, 2017
238
October, 2019
229
August, 2021
193
May, 2020
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
65
May, 2022
61
July, 2019
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
25
February, 2020
23
October, 2017
19
April, 2020
17
November, 2018
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
5
March, 2019
4
November, 2020
4
September, 2017
3
December, 2019
2
January, 2018
1
August, 2022
Available data
186
bam
160
bigWig
151
bed narrowPeak
49
tagAlign
47
bigBed narrowPeak
8
tsv
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
238
Homo sapiens
Biosample type
238
tissue
32
primary cell
28
cell line
8
in vitro differentiated cells
Organ
86
brain
65
limb
40
nerve
24
artery
24
blood vessel
24
vasculature
21
eye
8
heart
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
238
AMP
Genome assembly (visualization)
159
hg19
157
GRCh38
Lab
238
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
small RNA-seq
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
238 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
35
4
1
tibial artery
23
1
heart
5
2
1
brain
5
1
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