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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
106
ATAC-seq
Assay category
154
DNA binding
106
DNA accessibility
Target of assay
149
histone
149
histone modification
84
broad histone mark
65
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
114
May, 2021
66
August, 2021
40
May, 2024
38
May, 2022
2
February, 2023
Available data
296
bigWig
260
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
102
tsv
84
tagAlign
66
txt
64
xls
5
hic
4
bed bed3+
3
bed bedgraph
3
bedpe bed3+
3
cool
2
bed broadPeak
Organism
260
Homo sapiens
Biosample type
142
tissue
114
primary cell
4
in vitro differentiated cells
Organ
64
kidney
40
heart
20
liver
18
pancreas
2
connective tissue
Project
176
AMP
84
T1D
Genome assembly (visualization)
188
GRCh38
156
hg19
Lab
AMP-T2D consortium
132
Kyle Gaulton, UCSD
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
20
Karen Mohlke, UNC
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_title!
small RNA-seq
lab.title!
AMP-T2D consortium
Bing Ren, UCSD
BIOSAMPLE
ASSAY
260 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
kidney
64
left cardiac atrium
40
liver
20
islet of Langerhans
18
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
30
in vitro differentiated cells
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
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