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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
59
total RNA-seq
17
pCHi-C
12
ATAC-seq
Assay category
154
DNA binding
59
Transcription
12
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
235
May, 2021
198
May, 2022
168
August, 2021
102
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
40
May, 2024
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
3
October, 2022
1
October, 2017
Available data
182
bigWig
135
bam
114
bed narrowPeak
84
tagAlign
51
tsv
7
fastq
2
bed bed3+
Organism
242
Homo sapiens
Biosample type
193
primary cell
47
in vitro differentiated cells
2
tissue
Organ
8
pancreas
7
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
152
T1D
83
AMP
7
HPAP
Genome assembly (visualization)
175
hg19
142
GRCh38
Lab
235
Kyle Gaulton, UCSD
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
1
inconsistent ontology term
assay_title!
small RNA-seq
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
242 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
ATAC-seq
primary cell
monocyte
84
51
1
CD8-positive, alpha-beta T cell
33
2
1
pancreatic alpha cell
5
CD4-positive, alpha-beta T cell
2
pancreatic beta cell
2
+ See 12 more…
in vitro differentiated cells
embryonic stem cell
37
5
5
tissue
pancreas
1
thymus
1
See all biosamples
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